The STTARR Innovation Centre brings together products, services and technologies to accelerate cutting-edge and multidisciplinary research in oncology, cardiology, metabolic diseases, and many other fields.
Flexible to the needs of our academic and industry clients, STTARR staff provides full support, from study conception to completion, including study design, budgeting, federal and provincial regulatory compliance, histopathology services, and advanced data analysis.
We focus on your success!
Years of Experience
Researchers Working with STTARR
STTARR’s advanced imaging instruments and experimental capabilities include CT, MR, PET, SPECT, ultrasound, photoacoustics, optical, and radiation therapy. The STTARR Correlative Pathology Laboratory is equipped with innovative technology enabling whole-mount pathology, thus preserving the geometric integrity of the sample and ensuring accurate correlation to in vivo imaging in a systematic way.
STTARR also has animal holding rooms, a cell culture facility, and dedicated wet lab space for developing new contrast agents, molecular probes, and radiotracers.
Multimodal in vivo imaging in small and large animal models
If your isotope or tracer is not mentioned, please talk to us !
The STTARR Pathology Core services all research laboratories
within UHN, academic institutes and industry sponsors on
pre-clinical research projects with full Histopathology services.
These services includes:
Inspect the samples for fixation statues, trimming harvest tissue to the plain of interest.
Regular cassettes size is 30mm x 35mm.
Supersize cassette for wholemount is 65mmX50mm.
Melt down paraffin block and re-orient the tissue into the desire cutting plain.
Sectioning OCT frozen tissue blocks prepared by users.
User provide fresh harvested tissue to STTARR Pathology for snap freezing in OCT.
Special snap freezing technique for muscle tissue prone to freeze artifact.
Sectioning paraffin and frozen section at routine 4um thickness or in special thickness requested by user.
Regular slides: 25mmx75mm.
Wholemount large slide:50mmx75mm.
Paraffin or frozen (per slide) consecutive sections from a ribbon of section mounted on slides labelled with numbers.
Look for specific microscopic structures in paraffin/frozen blocks and take sections eg. Mouse aortic arch, aortic root, mouse embryo thyroid glands.
Optimization of commercial and/or in house produced antibodies.
Check out our Pathology Optimized Antibody List for a list of antibodies currently available and optimized at STTARR Pathology. Please note that the list is continuously updated. If the antibody you are interested in is not on the list, please contact us .
Multiplex of up to 3 target proteins in cells/tissues using flourescent tagged antibodies.
Detection of DNA fragmentation in last phase of apoptosis (cell death).
Uitlizing ACDBio System probes and detection systems to detect target mRNA in paraffin embedded sections.
Masson trichrome, Elastic Trichrome, Picrosirius
red,Periodic acid Schiff, Cresyl echt violet, Luxol fast
blue, Gram stain, von Kossa calcium, Oil O red, Gordon &
Sweets Siliver Reticular fiberstain, Safranin O and fast
green, TRAP(Tartaric Acid Resistant Phosphotase).
STTARR Pathology has other histochemistry stain protocols that are available upon request, please inquire if the stain that you are interested is not on the list.
Principle and routine stain used in histopathology perform on paraffin or frozen sections.
Sectioning thick sections (3--50microns) for autoradiography, 2 sets of slides each sample. Protocol on sample preparation for autoradiography available upon request.
Centrifuge cell pellet and double embed into agar gel and paraffin.
Formic acid for rapid decalcification or EDTA for tissue to be used for IHC.
Havest tissue for toxicology study or specific organ of interest.
Combining multiple donor tissue parrafin blocks into one for high throughput IHC staining.
Pathology and correlative image analysis
Scientific consulting & project management, workshops, user training and facility tours available
Our equipment is designed to facilitate multidisciplinary collaborations.
CT combines a series of x-ray images taken from different angles around the subject or animal. Taking advantage of the differences in the x-ray attenuation properties of the various tissues and organs, computer processing creates cross-sectional images (slices) of the internal structures.
A MRI scan uses the magnetization from water protons to generate images in which brightness can reflect not only the density of water protons in tissue but also the interaction of water protons with their local microenvironment. These images provide an unparalleled soft tissue contrast, enabling both anatomic and functional imaging for monitoring tumor growth and response to therapies.
The nuclear medicine modalities of PET (Positron Emission Tomography) and SPECT (Single Photon Emission Computed Tomography) rely on injection (or sometimes inhalation) of a radioactive tracer. Nuclear medicine and molecular imaging techniques provide unique insight into the visualization, characterization, and measurement of biological processes at the molecular and cellular levels.
PET is a nuclear medicine imaging modality that detects the emissions of radiolabelled tracers. As positron-emitting isotopes decay, positrons interact with electrons in the subject. When a positron and electron interact, an annihilation event occurs in which the mass of these subatomic particles is converted into energy (E = mc2) in the form of two 511 keV gamma rays emitted at 180° apart from each other. These gamma ray pairs, resulting from annihilation events, are what is detected by the PET scanner.
SPECT is an imaging technique based on the detection of gamma rays emitted by radioactive tracers. The scanner consists of four gamma camera heads (scintillating sodium iodide crystals doped with thallium) with pinhole collimators that rotate around the subject. The SPECT computer reconstructs a 3-D tomographic image from the acquisition of 2-D images at multiple angles (projections). Isotopes useful for SPECT imaging emit gamma rays with energies between ~25 – 250 keV. They are high atomic number metals commonly used to label molecules of biological significance.
Fluorescence and Bioluminesence imaging techniques.
Real-time images are generated by applying high-frequency sound and then detecting the returning sound waves (echoes) caused by differences in acoustic impedence of the various tissue interfaces within the subject of interest. In addition to 2D B-mode images, anatomical 3D images of a small region can also be obtained. If the ultrasound beam is directed into a blood vessel, the blood flow gradient can be measured by a technique known as the Doppler effect. Visualization of blood flow can be further enhanced by the use of acoustic contrast agents such as microbubbles.
The photoacoustic (PA) effect refers to the generation of acoustic waves from an object being illuminated by pulsed or modulated electromagnetic (EM) radiation, including optical waves. The fundamental principle of the PA effect is based on the thermal expansion resulting from the absorption of EM radiation. The thermal expansion increases the acoustic pressure in the medium. Pulsing or modulating the EM radiation generates an acoustic wave which can be detected using an ultrasound transducer.
The X-Rad225 provides mid-range energy for high and low dose rate irradiation studies. A wide range of collimators are available for high precision targeting.
STTARR’s Image Analysis Core provides both self-service workstations and dedicated technician analysis of medical images coming from the STTARR facility scanners, as well as digital pathology and mass spectrometry image analysis. Our team can guide you through the available options and provide software training as needed.
We kindly request for authors who use STTARR resources to include
the following acknowledgement in their publication:
“The authors would like to acknowledge the Spatio-Temporal Targeting and Amplification of Radiation Response (STTARR) program and its affiliated funding agencies.”
Select a year to see a listing of articles published.
Date: March 30 & 31, 2020 | 8am
THE EVENT IS POSTPONED.
We will update you about new dates as soon as possible.
Description: The workshop will provide researchers with an overview of preclinical imaging instrumentation, applications, contrast agents…
Date: December 3, 2018 | 9:00am – 5:30pm
Description: STTARR will be holding a PET/MRI workshop this December 3rd to provide researchers with an overview of Preclinical PET/MRI imaging capabilities, contrast agents, translational and clinical studies.
Target Audience: Graduate students, technicians, research...
Date: July 20, 2018 | 10:00am – 4:00pm
Description: This STTARR workshop is designed to inform and train interested parties in the use of Definiens TissueStudio image analysis software. The image analysis core of STTARR has many years of experience in utilizing Definiens TissueStudio platform, and custom-built post-processing analysis tools, that are…
STTARR can be accessed by any researcher, regardless of organization. Please contact us to discuss your project needs, or submit our Facility Access Request Form if you want to create a new project. Please submit our Facility Access Amendment Form whenever new Users or new Resources are added to an existing STTARR #.
Please contact us for a free consultation to discuss your research needs with a member of our expert team. Meeting and discussing your research and goals is the best way for us to ensure the right technology and/or equipment is applied to your project.